Novosibirsk State University Journal of Information Technologies
Scientic Journal

ISSN 2410-0420 (Online), ISSN 1818-7900 (Print)

Switch to
Russian

All Issues >> Contents: Volume 12, Issue No 2 (2014)

JACOBI 4 software for multivariate analysis of microarray data
D. A. Polunin, I. A. Shtayger, V. M. Efimov

Novosibirsk State University
Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences
Institute of Systematics and Ecology of Animals Siberian Branch of RAS
Tomsk State University

UDC code: 004.031.2

Abstract
JACOBI 4 software is a forth version of JACOBI package, which is designed for multivariate analysis of microarray data. JACOBI is intended tobe an application which boosts a new technology created in Institute of Cytology and Genetics.It consists of a suite of opensource programs, which implement different algorithms for multivariateanalysis. The suite of programs can be easily extended or changed by both user who has a lot of experience in PC and rather inexperienced user.

Key Words
suite, multivariate analysis, script language, script, program, subprogram

How to cite:
Polunin D. A., Shtayger I. A., Efimov V. M. JACOBI 4 software for multivariate analysis of microarray data // Vestnik NSU Series: Information Technologies. - 2014. - Volume 12, Issue No 2. - P. 90–98. - ISSN 1818-7900. (in Russian).

Full Text in Russian

Available in PDF

References
1. Efimov V. M. Structure of software suite for multivariate analysis of biological data. Bulletin, Novosibirsk, VASKhNIL, Siberian branch, SibRIAChem., 1983, issue 18, p. 34–38.
2. Efimov V. M., Rechkin D. V. JACOBI – input language for software suite for statistical processing of biological data. Bulletin. Novosibirsk, VASKhNIL, Siberian branch, SibRIAChem., 1985, no. 48, p. 12–17.
3. Agbash I. A., Polunin D. A., Susloparov D. S., Shtayger I. A. Software suite for multivariate analysis of microarray data. Multidimensional PLS analysis. Proceedings of the 50th international students scientific conference ISSC-2012: Information technologies, April, 13–19, 2012, NSU, Novosibirsk, 2012, p. 123.
4. Shtayger I. A. Software suite for multivariate analysis of microarray data: interface, language. Proceedings of the 50th international students scientific conference ISSC-2012: Information technologies, April, 13–19, 2012, NSU, Novosibirsk, 2012, p. 180.
6. Polunin D. A. Jacobi 4: core algorithms of multivariate analysis, special methods of bioinformatics. Proceedings of the 51st international students scientific conference ISSC-2012: Information technologies, April, 12–18, 2013, NSU, Novosibirsk, 2013, p. 54.
7. Polunin D. A. Software suite for multivariateanalysis of microarray data: algorithms of multivariate analysis. Proceedings of the 50th internationalstudents scientific conference ISSC-2012: Information technologies, April, 13–19, 2012, NSU, Novosibirsk, 2012, p. 168.
8. Borovecki F., Lovrecic L., Zhou J., Jeong H., Then F., Rosas H. D., Hersch S. M., Hogarth P., Bouzou B., Jensen R. V., Krainc D. Genome-wide expression profiling of human blood reveals biomarkers for Huntington's disease. PNAS, 2005. no. 102 (31), p. 23–28.
5. Agbash I. A. JACOBI 4 software for multivariate analysis of microarray data: implementation of database functions and data format conversions. Proceedings of the 50th international students scientific conference ISSC-2012: Information technologies, April, 13–19, 2012, NSU, Novosibirsk, 2012, p. 64.

Publication information
Main title Vestnik NSU Series: Information Technologies, Volume 12, Issue No 2 (2014).
Parallel title: Novosibirsk State University Journal of Information Technologies Volume 12, Issue No 2 (2014).

Key title: Vestnik Novosibirskogo gosudarstvennogo universiteta. Seriâ: Informacionnye tehnologii
Abbreviated key title: Vestn. Novosib. Gos. Univ., Ser.: Inf. Tehnol.
Variant title: Vestnik NGU. Seriâ: Informacionnye tehnologii

Year of Publication: 2014
ISSN: 1818-7900 (Print), ISSN 2410-0420 (Online)
Publisher: Novosibirsk State University Press
DSpace handle


|Home Page| |All Issues| |Information for Authors| |Journal Boards| |Ethical principles| |Editorial Policy| |Contact Information| |Old Site in Russian|

inftech@vestnik.nsu.ru
© 2006-2017, Novosibirsk State University.